DNA, RNA & Protein as Information Molecules

IGS 350/550 Computer Laboratory

M. Rice / M. Weir


  1. DNA is composed of four types of bases (ATCG). What would be the implications if DNA structure had the four bases organized in clumps of four -- (ATCG)(ATCG)(ATCG)(ATCG)(ATCG)...... What is the evidence that this is not the case? (check out CSH: DNA/proteins (click "animation"), CSH: Watson/Crick)

  2. Is ATGCGC equivalent to CGCGTA? Explain why/why not.

  3. Is ATGCGC equivalent to GCGCAT? Explain why/why not.

  4. Does RNA sequence match DNA sequence?

  5. What is cDNA?

  6. Illustrated is an alignment of the engrailed gene cDNA and genomic DNA sequences. [engrailed is a gene required for embryo development.] Explain the relationship between the sequences. Consider how this alignment of cDNA and genomic DNA sequences might have been obtained.

  7. Could codons be 2 nucleotides long? (check out CSH: codons)

  8. If you know a protein sequence, do you know its DNA sequence?

  9. Is the protein sequence MASS equivalent to SSAM? Explain why/why not. (check out jkimbal link)

  10. Does amino acid sequence determine protein structure and function?


Assignment:

Summarize at least three properties of RNA, DNA or protein sequences that have been considered in this session.


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